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🧭 Cruise and field
KPH QGIS cruise planner
Procedures at sea
Interpreting SAR imagery
Storage and logistics
NPI Tromsø storage overview
🚢 Shipboard CTD
🌊 Overview of CTD data post-processing
1) Automated batch processing using SeaBird software
2a) Post-processing in Matlab and NetCDF-Creator
2b) Post-processing in Python
📝 Detailed step-by-step recipe for CTD post-processing using NPI tools
🫧 Guide to measuring oxygen from water samples (Winkler titration)
Theoretical Background
Equipment and reagents
Seawater Sampling
Titration Procedure
🥼 Guide to measuring laboratory salinity from water samples
General notes
Overview of the salinometer
Collecting samples at sea
Preparations for laboratory sampling
Laboratory salinometer sampling
Finishing up
Troubleshooting
🔍 Quality control of CTD salinity data
🧪 Water sampling protocols
Chlorophyll & phaeopigments protocol
Nutrients sampling protocol
Phytoplankton taxonomy sampling protocol
POC/PON sampling protocol
⚓ Ocean moorings
Mooring data post-processing
Mooring data post-processing - Fram Strait guidelines
Suggested directory structure - Fram Strait guidelines
Mooring operations at sea
Calibration of moored instruments
Inductive instruments
Setup of inductive loops
🔬 Other instruments
Overview of oceanographic instruments
Instrument categories
Instrument costs
MSS microstructure profiler
MSS deployment
MSS deployment checklist
MSS setup
Troubleshooting
Lowered ADCP (LADCP)
LADCP deployment checklist
LADCP script for master programming and starting
LADCP processing recipe
Troubleshooting LADCP processing
Thermosalinograph CTD and fCO2
KPH TSG and fCO2
Various gadgets
Go-Pro camera
Tascam acoustic recorder
🧊 Sea ice
🌐 Numerical Modeling
Sigma2 HPC
Compiling METROMS on Olivia
Tips for working on Sigma2
Model applications maintained at NPI
Regional FVCOM configuration for the Atlantic sector of the Southern Ocean
💾 Data archiving
Data publication
Naming and organizing files
Suggested file naming and directory structure (from the Fram Strait program)
NetCDF file format
Resources and guidelines for NetCDF formatting
Quality indicators
processing_level
and
QC_indicator
🛠️ Useful stuff
Software help
Python setup with Miniforge/Mamba (Windows)
Git (version control)
Git command line Cheat Sheet
External resources
HavNett - about / contributions
About HavNett
Contributing to HavNett
Submitting an issue
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Markdown for HavNett
NPIOcean internal GitLab
NPIOcean at GitHub
⬇ HavNett offline copy
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.md
.pdf
Regional FVCOM configuration for the Atlantic sector of the Southern Ocean
Regional FVCOM configuration for the Atlantic sector of the Southern Ocean
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To be completed!
